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1. (US20160224749) Method and system for microbiome-derived diagnostics and therapeutics for conditions associated with microbiome taxonomic features

Office : United States of America
Application Number: 15098174 Application Date: 13.04.2016
Publication Number: 20160224749 Publication Date: 04.08.2016
Grant Number: 10265009 Grant Date: 23.04.2019
Publication Kind : B2
IPC:
G01N 33/48
A61B 5/00
G06F 19/28
C12Q 1/689
G06F 19/00
G06F 19/24
G16H 50/70
G16H 50/20
G PHYSICS
01
MEASURING; TESTING
N
INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
33
Investigating or analysing materials by specific methods not covered by groups G01N1/-G01N31/131
48
Biological material, e.g. blood, urine; Haemocytometers
A HUMAN NECESSITIES
61
MEDICAL OR VETERINARY SCIENCE; HYGIENE
B
DIAGNOSIS; SURGERY; IDENTIFICATION
5
Measuring for diagnostic purposes; Identification of persons
G PHYSICS
06
COMPUTING; CALCULATING; COUNTING
F
ELECTRIC DIGITAL DATA PROCESSING
19
Digital computing or data processing equipment or methods, specially adapted for specific applications
10
Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
28
for programming tools or database systems, e.g. ontologies, heterogeneous data integration, data warehousing or computing architectures
[IPC code unknown for C12Q 1/689]
G PHYSICS
06
COMPUTING; CALCULATING; COUNTING
F
ELECTRIC DIGITAL DATA PROCESSING
19
Digital computing or data processing equipment or methods, specially adapted for specific applications
G PHYSICS
06
COMPUTING; CALCULATING; COUNTING
F
ELECTRIC DIGITAL DATA PROCESSING
19
Digital computing or data processing equipment or methods, specially adapted for specific applications
10
Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
24
for machine learning, data mining or biostatistics, e.g. pattern finding, knowledge discovery, rule extraction, correlation, clustering or classification
[IPC code unknown for G16H 50/70][IPC code unknown for G16H 50/20]
CPC:
A61B 5/4211
A61B 5/4233
A61B 5/4836
A61B 5/4839
C12Q 1/689
C12Q 2600/112
G06F 19/24
G06F 19/28
G06F 19/3418
G16H 50/20
G16H 50/70
Y02A 90/26
Applicants: uBiome, Inc.
Inventors: Zachary Apte
Daniel Almonacid
Jessica Richman
Siavosh Rezvan Behbahani
Agents: Kilpatrick Townsend & Stockton LLP
Priority Data:
Title: (EN) Method and system for microbiome-derived diagnostics and therapeutics for conditions associated with microbiome taxonomic features
Abstract: front page image
(EN)

A method for at least one of characterizing, diagnosing, and treating a condition associated with microbiome taxonomic features in at least a subject, the method comprising: receiving an aggregate set of biological samples from a population of subjects; generating at least one of a microbiome composition dataset and a microbiome functional diversity dataset for the population of subjects; generating a characterization of the condition based upon features extracted from at least one of the microbiome composition dataset and the microbiome functional diversity dataset; based upon the characterization, generating a therapy model configured to correct the condition; and at an output device associated with the subject, promoting a therapy to the subject based upon the characterization and the therapy model.