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1. WO2013141266 - METHOD FOR DETECTING NOVEL RET FUSED BODY

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Publication Number WO/2013/141266
Publication Date 26.09.2013
International Application No. PCT/JP2013/057951
International Filing Date 21.03.2013
IPC
C12Q 1/68 2006.01
CCHEMISTRY; METALLURGY
12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
1Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
68involving nucleic acids
C12N 15/09 2006.01
CCHEMISTRY; METALLURGY
12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
15Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
09Recombinant DNA-technology
G01N 33/50 2006.01
GPHYSICS
01MEASURING; TESTING
NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
33Investigating or analysing materials by specific methods not covered by groups G01N1/-G01N31/131
48Biological material, e.g. blood, urine; Haemocytometers
50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
G01N 33/68 2006.01
GPHYSICS
01MEASURING; TESTING
NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
33Investigating or analysing materials by specific methods not covered by groups G01N1/-G01N31/131
48Biological material, e.g. blood, urine; Haemocytometers
50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
68involving proteins, peptides or amino acids
CPC
C12Q 1/6886
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1Measuring or testing processes involving enzymes, nucleic acids or microorganisms
68involving nucleic acids
6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
6883for diseases caused by alterations of genetic material
6886for cancer
C12Q 2600/106
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12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS
2600Oligonucleotides characterized by their use
106Pharmacogenomics, i.e. genetic variability in individual responses to drugs and drug metabolism
C12Q 2600/156
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12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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2600Oligonucleotides characterized by their use
156Polymorphic or mutational markers
G01N 2333/71
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01MEASURING; TESTING
NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
2333Assays involving biological materials from specific organisms or of a specific nature
435from animals; from humans
705Assays involving receptors, cell surface antigens or cell surface determinants
71for growth factors; for growth regulators
G01N 2333/82
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01MEASURING; TESTING
NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
2333Assays involving biological materials from specific organisms or of a specific nature
82Translation products from oncogenes
G01N 33/5748
GPHYSICS
01MEASURING; TESTING
NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
33Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
48Biological material, e.g. blood, urine
50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
53Immunoassay; Biospecific binding assay; Materials therefor
574for cancer
5748involving oncogenic proteins
Applicants
  • アステラス製薬株式会社 ASTELLAS PHARMA INC. [JP]/[JP]
Inventors
  • 鈴木　淳 SUZUKI ATSUSHI
  • 角山　和久 TSUNOYAMA KAZUHISA
  • 浅海　真 ASAUMI MAKOTO
Agents
  • 森田　拓 MORITA, Hiroshi
Priority Data
2012-06543622.03.2012JP
Publication Language Japanese (JA)
Filing Language Japanese (JA)
Designated States
Title
(EN) METHOD FOR DETECTING NOVEL RET FUSED BODY
(FR) PROCÉDÉ POUR DÉTECTER UN NOUVEAU CORPS FUSIONNÉ RET
(JA) 新規ＲＥＴ融合体の検出法
Abstract
(EN)
[Problem] To clarify a polynucleotide that is a novel causative gene for cancer to thereby provide a method for detecting the aforesaid polynucleotide or a polypeptide encoded thereby and a kit and a primer set for the detection method. [Solution] Based on a finding that a fused gene consisting of a part of PIBF1 gene and a part of RET gene, said fused gene occurring in some cancer patients, is a causative gene for cancer, a method for detecting a polynucleotide that is the aforesaid gene and a polypeptide encoded thereby has been constructed. According to this detection method, a fused gene consisting of a part of PIBF1 gene and a part of RET gene or a fused protein encoded thereby is detected. The aforesaid primer set or detection kit contains a sense primer that is designed on the basis of the part originating in PIBF1 gene and an antisense primer that is designed on the basis of the part originating in RET gene.
(FR)
[Problème] l'invention vise à clarifier un polynucléotide qui est un nouveau gène responsable du cancer pour ainsi fournir un procédé de détection du polynucléotide mentionnée ci-dessus ou d'un polypeptide codé par ce dernier et un kit et un ensemble d'amorce pour le procédé de détection. [Solution] sur la base d'une découverte qu'un gène fusionné constitué du gène PIBF1 une partie de PIBF1 une partie de gène RET, ledit gène fusionné se produisant chez certains des patients atteints de cancer, est un gène causal du cancer, un procédé pour détecter un polynucléotide qui est le gène mentionné ci-dessus et un polypeptide codé a ainsi été construit. Selon ce procédé de détection, un gène fusionné constitué du gène PIBF1 et une partie de gène RET ou une protéine de fusion ainsi codées est détectée. L'amorce précitée ensemble ou par kit de détection contiennent une amorce sense qui est conçue sur la base de la partie provenant du gène PIBF1 et une amorce antisense qui est conçue sur la base de la partie provenant de gène RET.
(JA)
【課題】癌の新たな原因遺伝子であるポリヌクレオチドを解明し、これにより、当該ポリヌクレオチド又はそれがコードするポリペプチドの検出方法、及びそのためのキット及びプライマーセットを提供することを課題とする。 【解決手段】癌患者の一部に存在している、ＰＩＢＦ１遺伝子の一部とＲＥＴ遺伝子の一部との融合遺伝子が癌の原因遺伝子であることを見出し、当該遺伝子であるポリヌクレオチド及びそれがコードするポリペプチドの検出方法を構築した。前記検出方法では、ＰＩＢＦ１遺伝子の一部とＲＥＴ遺伝子の一部との融合遺伝子、あるいは、それがコードする融合蛋白質を検出する。前記プライマーセット又は検出用キットは、ＰＩＢＦ１遺伝子由来部分から設計されるセンスプライマーと、ＲＥＴ遺伝子由来部分から設計されるアンチセンスプライマーとを含む。
Also published as
JP2015109806
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