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1. WO2000043939 - DESCRIBING AND STORING METHOD OF ALIGNMENT INFORMATION

Publication Number WO/2000/043939
Publication Date 27.07.2000
International Application No. PCT/JP2000/000355
International Filing Date 25.01.2000
Chapter 2 Demand Filed 14.06.2000
IPC
C12N 15/09 2006.01
CCHEMISTRY; METALLURGY
12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
15Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
09Recombinant DNA-technology
G01N 33/48 2006.01
GPHYSICS
01MEASURING; TESTING
NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
33Investigating or analysing materials by specific methods not covered by groups G01N1/-G01N31/131
48Biological material, e.g. blood, urine; Haemocytometers
G06F 17/30 2006.01
GPHYSICS
06COMPUTING; CALCULATING OR COUNTING
FELECTRIC DIGITAL DATA PROCESSING
17Digital computing or data processing equipment or methods, specially adapted for specific functions
30Information retrieval; Database structures therefor
G06F 19/28 2011.01
GPHYSICS
06COMPUTING; CALCULATING OR COUNTING
FELECTRIC DIGITAL DATA PROCESSING
19Digital computing or data processing equipment or methods, specially adapted for specific applications
10Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
28for programming tools or database systems, e.g. ontologies, heterogeneous data integration, data warehousing or computing architectures
G06F 19/22 2011.01
GPHYSICS
06COMPUTING; CALCULATING OR COUNTING
FELECTRIC DIGITAL DATA PROCESSING
19Digital computing or data processing equipment or methods, specially adapted for specific applications
10Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
22for sequence comparison involving nucleotides or amino acids, e.g. homology search, motif or Single-Nucleotide Polymorphism discovery or sequence alignment
CPC
G16B 30/00
GPHYSICS
16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
30ICT specially adapted for sequence analysis involving nucleotides or amino acids
G16B 50/00
GPHYSICS
16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
50ICT programming tools or database systems specially adapted for bioinformatics
Applicants
  • INSTITUTE OF MEDICINAL MOLECULAR DESIGN. INC. [JP/JP]; 4th floor, Kadokawa-hongo Bldg. 24-5, Hongo 5-chome Bunkyo-ku, Tokyo 113-0033, JP (AllExceptUS)
  • TOYODA, Tetsuro [JP/JP]; JP (UsOnly)
  • ITAI, Akiko [JP/JP]; JP (UsOnly)
Inventors
  • TOYODA, Tetsuro; JP
  • ITAI, Akiko; JP
Agents
  • IMAMURA, Masazumi ; 5th floor, KRF Bldg. 5-5, Kyobashi 1-chome Chuo-ku Tokyo 104-0031, JP
Priority Data
11/1518925.01.1999JP
Publication Language English (EN)
Filing Language English (EN)
Designated States
Title
(EN) DESCRIBING AND STORING METHOD OF ALIGNMENT INFORMATION
(FR) PROCEDE DE DESCRIPTION ET DE STOCKAGE DE DONNEES D'ALIGNEMENT
Abstract
(EN)
A description and storing method of an alignment information characterized by the separation of an alignment information on an amino-acid sequence or a nucleic-acid sequence into a sequence information and a gap information expressing correspondence between sequences.
(FR)
La présente invention concerne un procédé de description et de stockage de données d'alignement caractérisé par la séparation d'une information d'alignement concernant une séquence d'acides aminés ou une séquence d'acides nucléiques en une information de séquence et une information d'espacement exprimant une correspondance entre séquences.
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