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1. (WO1992009604) 6-AZIDO-2-FLUOROPURINE
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6-AZID0-2-FLU0R0PURINE

Background of the Invention
This invention relates to a composition of matter and a method for producing the same, and is particularly related to the compound 6-azido-2-fluoropurine, useful in the synthesis of fludarabine or fludarabine phosphate and related nucleoside pharmacologic agents.
Fludarabine phosphate, also known as
9-?-D-arabinofuranosyl-2-fluoroadenine-5'-phosphate, is a prodrug of the anti-cancer agent, 9-J-D-arabinofuranosyl-2-fluoroadenine. Accordingly, fludarabine phosphate is a chemotherapeutically effective form of the drug and is converted to the parent drug in vivo. U.S. Pat. No. 4,210,745 discloses one method of synthesizing the anti-cancer agent and U.S. Pat. No. 4,357,324 teaches the phosphorylation of said agent to yield fludarabine phosphate. In summary, fludarabine and fludarabine phosphate are commonly made by the following process:
(a) acetylation: 2,6-diaminopurine (also referred to as 2-aminoadenine) in a mixture of pyridine and acetic anhydride is refluxed to yield 2,6-diacetamidopurine, thus protecting the amino groups with acetyl groups;
(b) coupling: 2,3,5-tri-O-benzyl-l-O-β-nitrobenzoyl-D-arabinofuranose is converted to its corresponding chlorosugar 2,3,5-tri-O-benzyl-l-chloro-α-D-arabinofuranose, which is then

SUBSTITUTE SHEET coupled with 2,6-diacetamidopurine in ethylene dichloride in the presence of molecular sieves for several days until all of the chlorosugar is consumed, to yield the protected nucleoside 2,6-diacetamido-9-(2,3,5-tri-0-benzyl-S-D-arabinofuranosyl)- purine;
(c) deacetylation: the protected nucleoside is refluxed with methanolic sodium methoxide to remove the acetyl groups yielding the nucleoside 2-amino-9-(2,3,5-tri-0-benzyl- J-D-arabinofuranosyl )adenine;
(d) diazotization/fluorination: the protected nucleoside of step (c) undergoes diazotization and fluorination by reaction with sodium nitrite and fluoboric acid in a tetrahydrofuran-fluoboric acid (THF-HBF4) system, to yield 9-(2,3,5-tri-0-benzyl- ?-D-arabinofuranosyl ) -2-fl uoroadenine;
(e) debenzylation: the product from step (d) is treated with boron trichloride to remove the benzyl protecting groups; and lastly
(f) phosphorylation: the product from step (e) is mixed with phosphorous oxychloride in an alky! phosphate followed by hydrolysis in water, to yield 9-0-D-arabinofuranosyl -2-fluoroadenine-5' -phosphate, or fludarabine phosphate.
One of the disadvantages of this process is that the chlorosugar used in step (b) is very costly. Since the
diazotization/fluorination reaction in step (d) has a relatively low yield, much of the chlorosugar is similarly wasted.

SUBSTΠΌTE SHEET Therefore, one way to improve this process is by introducing the 2-fluoro group before the coupling step. In this matter, the amount of chlorosugar needed for a given yield will be reduced. This invention provides one such means of improving the
fludarabine synthesis, along with providing a more convergent synthesis of other nucleosides.

Summary of the Invention
This invention pertains to novel methods of synthesizing fludarabine, fludarabine phosphate and related nucleoside pharmacologic agents utilizing 6-azido-2-fluoropurine as a novel intermediate.
In particular, this invention pertains to a synthesis of fludarabine where the relatively low-yield fluorination step is done before the costly coupling step.

Detailed Description of the Invention
The novel compound of this invention is 6-azido-2-fluoropurine (3), which is synthesized by the following scheme. First, 2-amino-6-chloropurine (1) is heated with an alkali metal azide and a polar solvent to yield 2-amino-6-azidopurine (2):



( 1 ) ( 2 )
SUBSTITUTE SHEET Suitable alkali metal azides include lithium azide (LiN3), sodium azide (NaN3) and potassium azide (KN3), with the preferred alkali metal azide being NaN3. The preferred solvent is aqueous dimethyl sulfoxide (DMSO). Reaction temperatures of 50-130βC are acceptable, however, 100-110°C is the preferred range. The reaction time may vary from 1 to 48 hours, however, the preferred time is 12-24 hours.
Second, compound (2) undergoes diazotization and fluorination reactions to yield the novel compound, 6-azido- 2-fluoropurine (3):


(2) (3)

Suitable media for carrying out the diazotization and fluorination reactions of this invention comprise a diazotization agent, one or more fluorination agents, and one or more polar solvents.
Suitable diazotization agents are nitrites, which include, without limitation, alky! nitrites such as isobutyl-nitrite and, in particular, tertiary alky! nitrites such as t-butylnitrile, and alkali metal nitrites such as sodium and potassium nitrite.
Suitable fluorination agents include, without
limitation, hydrogen fluoride (HF) and fluoboric acid (HBF4) or

SUBSTITUTE SHEET salts thereof. The solvents can be anhydrous or aqueous and include, without limitation, water, pyridine and tetrahydrofuran (THF).
The preferred medium is an alky! nitrite, aqueous fluoboric acid and THF.
The reaction temperature may be varied over a wide range between -30°C and 60°C. Preferably the reaction is begun below OβC and allowed to warm to ambient temperature over the course of 10 minutes to 3 hours and may be heated briefly to complete the reaction.
Azidopurine compounds such as (2) and (3) and their nucleoside derivatives can be represented by the general
structure (A) wherein X is fluoro or amino and R is hydrogen or (protected)sugar. These compounds may exist in equilibrium with the corresponding tetrazolo-tautomer (B).


(A) (B)

The ratio of tautomers (A) and (B) may depend on a number of factors such as the state of the sample (i.e., solid vs. solution), the nature of the solvent when the sample is in solution, the pH of the solution and on the identity of X.

SUBSTITUTE SHEET Evidence of this equilibration of structures (A) and (B) may be seen by the spectroscopic techniques used for characterization of these compounds; however, it does not detract from the utility of these compounds as synthetic intermediates. For purposes of clarity, these compounds will be represented and identified as 6-azidopurine tauto er (A). This representation is intended to include any and all ratios of the tautomeric formulas (A) and (B) wherein X and R are as defined herein.
The novel compound of this invention, 6-azido-2-fluoropurine, finds particular usefulness in the synthesis of nucleosides such as fludarabine and its prodrug, fludarabine phosphate. This synthesis begins with coupling 6-azido-2-fluoropurine (3) with a protected chlorosugar 2,3,5-tri-0-benzyl-1-chloro-α-D-arabinofuranose (4) to yield 6-azido-2-fluoro-9-(2,3,5-tri-0-benzyl-0-D-arabinofuranosyl)purine (5), (Bn = benzyl group). The chlorosugar (4) is readily synthesized by the reaction described in Glaudemans et al., J. Org. Chem. 28:3004-3006 (1963),



(5)

SUBSTITUTE SHEET which is incorporated herein by reference, and the best results are obtained with freshly prepared chlorosugar.
The coupling of (3) with (4) may be accomplished in a variety of solvents with the aid of suitable catalysts or reagents. For example, the reaction may be performed in a halocarbon solvent such as ethylene dichloride or dichloromethane or in polar aprotic solvents such as acetonitrile, or
N,N-dimethylformamide (DMF) or in mixtures thereof, in the presence of a tertiary amino reagent such as
N,N-diisopropylethylamine. Molecular sieve may serve as a catalyst in these solvents in place of the tertiary amine. A hydride base such as sodium hydride may also be employed as a reagent; with a hydride base, however, polar aprotic solvents, or mixtures thereof, are preferred over halocarbon solvents.
Reaction temperatures of 0°C to HOT may be employed. However, temperatures between 20°C and the reflux temperature of the solvent are preferred. Reaction times may vary from
approximately 10 minutes to 7 days depending on the reaction temperature and on the catalyst or reagent used.
Catalytic hydrogenolysis of the protected nucleoside (5) reduces the azide to an amine and cleaves the 0-benzyl groups to yield the nucleoside 9-0-D-arabinofuranosyl-2-fluoroadenine (6).



(5) (6)

SUBSTITUTE SHEET Preferably, this reaction is accomplished by conventional hydrogenation over a palladium catalyst in an alcoholic solvent. The results are generally improved by the addition of an acid catalyst such as aqueous hydrochloric acid to the reaction mixture. The required reaction time may vary from 1 hour to several days. Hydrogen pressures of 1 to 10 atmospheres (atm) are suitable, but the preferred pressure range is 2 to 5 atm.
Alternatively, in a more preferred process, the reduction of the azide to an amine and the removal of the benzyl protecting groups can be accomplished in separate steps. First, 6-azido-2- fluoro-9-(2,3,5-tri-0-benzyl-J-D-arabinofuranosyl)purine (5) is converted to 9- (2,3, 5-tri-0-benzyl-^-D-arabinofuranosyl ) - 2-fiuoroadenine (7) by reaction with a suitable reducing agent.



(5) (7) (6)

Without limitation, examples of suitable reducing reagents would include sodium borohydride or the combination of a dithiol and an amine such as 1,3-propanedithiol and triethyla ine as described by Bayley et al., Tetrahedron Lett., pp. 3633-3364 (1978), which is incorporated herein by reference. With these reagents the

SUBSTITUTE SHEET reaction is best performed in an alcoholic solvent such as ethanol , ethanol or 2-propanol or a mixture of alcoholic
solvents, but water or nonprotic solvents may be added if
desired. This reaction proceeds at temperatures of 0-100βC;
however, in the preferred process, the reaction is begun at ambient temperature and may be heated to 50" (or to the normal boiling point of the solvent being used. Next, (7) is converted to 9-J-D-arabinofuranosyl-2-fluoroadenine (6). The process for this conversion has been set forth in U.S. Pat. No. 4,210,745 which is incorporated herein by reference. The two-step process has the advantage that the sensitive intermediate (5) need not be isolated.
If desired, 9-j3-D-arabinofuranosyl-2-fluoroadenine (6) can be phosphorylated to yield 9-)-D-arabinofuranosyl-2-fluoroadenine-5'-phosphate (8). This phosphorylation involves the reaction of 9-)8-D-arabinofuranosyl -2-fluoroadenine with



(6) (8)

phosphorous oxychloride in an alkyl phosphate, followed by hydrolysis in water, and can be done according to the method set

SUBSTITUTE SHEET forth in U.S. Pat. No. 4,357,324, which is incorporated herein by reference.
In another embodiment, the novel compound of this invention (3) finds usefulness in the synthesis of
2-fluoroadenine (9):


(3) (9)

Reduction of the azide (3) to form 2-fluoroadenine (9) can be accomplished in several ways depending upon the intended use of the product. If the main goal is to obtain a high yield of 2-fluoroadenine and sulfur containing impurities can be
tolerated, the reaction can be done with a dithiol -amine mixture such as 1,3-propanedithiol and triethyl amine. This reaction may be carried in an alcoholic solvent and nonprotic modifiers may be added; however, ethanol is the preferred solvent because the product readily precipitates from the otherwise homogeneous mixture and is easily isolated by filtration. Temperatures of 0° to 100°C may be used; however, ambient temperature is
preferred. The reaction is complete within minutes at this temperature; however, the best results are obtained when the mixture is allowed to stand for between 10 minutes and 4 hours to allow for complete precipitation of the product from solution.

SUBSTITUTE SHEET Alternatively, if sulfur containing impurities cannot be tolerated, the reaction can be done with a hydride reducing agent such as sodium borohydride, as described hereinabove for the preparation of (7) from (5).
By either method, the product is easily isolated by filtration. These processes for the preparation of (9) have several advantages over methods previously described. Most importantly, the product is easily isolated in high purity by a simple filtration. The overall synthesis of 2-fluoroadenine (9) from 2-amino-6-chloropurine proceeds in good yield and no chromatographic separations are required, thus the process is easily amenable to scale-up.
Reaction of (9) with chlorosugar (4) under conditions as described hereinabove for the coupling of (3) and (4) provides an alternative process for the preparation of (7). This process is most preferred because the intermediate (7) is a solid and may be isolated by filtration after the coupling reaction.



( 7 )

2-Fluoroadenine finds additional utility in that it can be enzymatically converted to (6) as reported by Montgomery in

SUBSTITUTE SHEET Nucleosides- Nucleotides and their Biological Applications, Rideout et al . eds., pp. 19-46 (1985), via the procedure of Krenitsky et al., Carbohydrate Research. 47:139-146 (1981).

Example 1
Synthesis of 2-Amino-6-azidopurine
A solution of sodium azide (14.08 g, 0.216 mol) in water

(35 mL) was added to a solution of 2-amino-6-chloropurine (28.27 g, 0.166 mol) in dimethyl sulfoxide (DMSO, 280 mL). The mixture was heated at 100-110°C for 24 h, then the resulting suspension was cooled and poured into 1.3 L of water. The precipitate was collected by filtration, washed with water and dried to afford 26.11 g of 2-amino-6-azidopurine, mp >260βC; IR (KBr) 3313, 3146, 1678, 1641, 1551 cm"1; 1H NMR (DMS0-d6, 360 MHz), δ 8.18 (s, 1H), 8.25 (bs, 2H), 13 (vbs, 1H); 13C NMR (DMS0-d6, 90 MHz), 110.8, 138.7, 143.4, 145.7, 146.1 ppm.

Example 2
Synthesis of 6-Azido-2-fluoropurine
A solution of 2-amino-6-azidopurine (13.0 g , 73.6 mmol) in tetrahydrofuran (THF, 163 L), and 48% aqueous HBF4 (42.24 mL) was cooled in a bath at -20°C. A solution of t-butylnitrite

(12.65 mL) in THF (10 mL) was added over a 5-minute period. The bath was replaced with an ice-water bath for 30 minutes and then with a bath at 50°C for 15 minutes. The mixture was then poured over ice (600 g), and water (200 mL) was added. The suspension

SUBSTITUTE SHEET was neutralized (pH 6-7) with saturated potassium carbonate (K2C03), and ethyl acetate was added. The resulting solid potassium fluoborate (KBF was collected by filtration and washed thoroughly with ethyl acetate. The aqueous layer was washed repeatedly with ethyl acetate and the combined ethyl acetate extracts were washed sequentially with water (500 L) and saturated sodium chloride (NaCl) (250 mL) and dried over magnesium sulfate (MgS04) along with decolorizing carbon. The ethyl acetate was then filtered through celite and concentrated in vacuo to afford 9.36 g of the title compound, mp 190-195°C (d) (from ethyl acetate/pet. ether; the decomposition or melting point of this material varies from sample to sample); IR (KBr) 2240, 2200, 1620, 1595, 1565 cm'1; MS (EI+, m/z), 179 (M% 55%), 151 ((M-N2)+, 100%); 1H NMR (DMS0-d6, 360 MHz), δ 8.53 (s, 1H), 13.8 (bs, 1H); 13C NMR (DMS0-d6, 90 MHz), 120 (very broad), 145.4 (broad), 152.2 (broad), 156 (very broad), 157.0 (d, JCF =-210 Hz) ppm; UV (MeOH) λmax, 250/ 286 n .

Example 3
Synthesis of 6-Azido-2-f1uoro- 9-(2,3.5-tri-0-benzyl-g-D-arabinofuranosv1)purine
A solution of 2,3,5-tri-0-benzyl- 1-Cϋ-D-arabinofuranosyl chl oride (freshly prepared from 1.9 g of

2,3 ,5-tri -0-benzyl -l-0-p.-nitrobenzoyl -D-arabinofuranose) ,
N,N-di isopropyl ethyl amine (0.58 mL) and 6-azido-2-fl uoropurine (0.50 g) in 10 mL of anhydrous 1 ,2-dichloroethane was heated at

SUBSTITUTE SHEET reflux overnight. Additional N,N-diisopropylethyl amine (0.26 mL) was added and heating was continued for an additional 24 hours. The mixture was cooled to ambient temperature and diluted with dichloromethane (60 L) and washed sequentially with 10% aqueous sodium hydroxide (NaOH), water, IN phosphoric acid (H3P04), saturated NaCl and then dried over MgS04 along with decolorizing carbon. The dried solution was filtered through celite and concentrated i_p vacuo. The residue was purified by silica gel chromatography with gradient elution from 3:1 Hexane: ethyl acetate to 100% ethyl acetate to obtain 0.40 g of the title compound as a colorless oil; IR (neat) 3031, 2922, 2867, 2126-, 1608 cm"1; 1H NMR (DMS0-d6, 360 MHz), δ 3.65-3.75 (m, 2H), 4.16 (q, ϋ = 5 Hz, IH), 4.22 (d, J = 11.8 Hz), 4.42 (t, J = 5.5 Hz, IH), 4.47 (d, J = 11.8 Hz, IH), 4.51 (s, 2H), 4.58 (t, J = 5.5 Hz, IH), 4.62 (d, J = 12.0 Hz, IH), 4.68 (d, J = 12.0 Hz, IH),

6.41 (d, J = 5.5 Hz, IH) , 6.9-6.95 (m, 2H), 7.1-7.2 (m, 3H), 7.25-7.4 (m, 10H), 8.48 (s, IH); UV (MeOH) λ^, 286 nm; MS (EI+, m/z) 582 (M+H)+.

Exampl e 4
Synthesis of 9-g-D-Arabinofuranosyl -2-fluoroadenine
6-Azido-2-fl uoro-9- (2, 3 , 5-tri -0-benzyl - J-D-arabinofuranosyl )purine (0.19 g) was dissolved in
2-methoxyethanol (20 mL) with palladium (II) chloride (PdCl2) (20 mg) and activated carbon and the mixture was hydrogenated at 55 pounds per square inch (psi) in a Parr shaker. The reaction was

SUBSTITUTE SHEET monitored by thin layer chromatography (TLC) until complete. The mixture was then filtered through celite and the filtrate was concentrated in vacuo. Three times, the residue was dissolved in ethanol and reconcentrated. Then the residue was recrystallized from ethanol/water to obtain 0.063 g of the title compound which was consistent in its structure with an authentic sample by IR and TLC.

Example 5
Synthesis of 9-(2.3.5-Tri-0-benzyl- g-D-arabinofuranosyl )-2-fluoroadenine
6-Azido-2-fluoro-9-(2,3,5-tri-0-benzyl- J-D-arabinofuranosyl)purine (0.28 g, 0.48 Mmol) was dissolved in warm 2-propanol (3 mL) and then cooled to about 25βC. To the resulting solution was added sodium borohydride (18 g, 0.48 Mmol) and the mixture was stirred at room temperature for 10 minutes and then at reflux for 15 minutes. The reaction was complete as determined by TLC so it was cooled to room
temperature and diluted with water (10 mL). The resulting precipitate was recovered by filtration to obtain 0.19 g of the title compound; mp 159-161°C (from toluene/ethanol). This material was identical by IR and TLC with an authentic sample of the title compound.

Example 6
Synthesis of 9-5-D-Arabinofuranosyl-2-f1uoroadenine
A solution of 2,3,5-tri-0-benzyl- 1-α-D-arabinofuranosylchloride (freshly prepared from 1.9 g of

SUBSTITUTE SHEET 2,3, 5-tr -0-benzyl -1-0-fi-nitrobenzoyl -D-arabinofuranose) and 6-azido-2-fluoropurine (0.50 g) in anhydrous acetonitrile (30 L) was stirred for 1 hour at room temperature and then 3 A molecular sieve (1.26 g, pellets) was added. The mixture was stirred under an inert atmosphere for 3 days and then filtered. The filtrate was concentrated under reduced pressure and the residue was dissolved in 2-propanol and methanol, and then sodium borohydride (0.13 g) was added. After stirring overnight at room temperature, the resulting precipitate was collected by filtration. The precipitate was washed with 2-propanol followed by boiling water and then dried to obtain 0.14 g of the title compound. The organic filtrates were concentrated under reduced pressure and the residue was partitioned between dichloromethane and water. The dichloromethane solution was dried over MgS04 and then filtered and placed on a silica gel column. Elution with 1% methanol in dichloromethane provided an additional 0.10 g of the title compound. Both samples were identical by IR and TLC to an authentic sample of the title compound.

Example 7
Synthesis of 2-Fluoroadenine
Triethyl amine (0.40 L) was added via syringe to a solution of 6-azido-2-fluoropurine (0.256 g) and
1,3-propanedithiol (0.29 mL) in methanol (13.5 mL). After 15 minutes, the reaction was complete as judged by TLC and a white precipitate had formed. The precipitate was collected by

SUBSTITUTE SHEET filtration and washed with two 10 mL portions of methanol and then dried to obtain 0.203 g of 2-fluoroadenine, mp >300°C. This material was identical to an authentic sample by TLC, NMR and IR.

Example 8
Synthesis of 2-Fluoroadenine
A sample of 6-azido-2-fluoropurine (0.18 g) was dissolved in warm 2-propanol (3 mL) and then cooled to ambient temperature. Sodium borohydride (38 mg) was added in small portions. The vigorous gas evolution was allowed to subside between additions. After the addition was complete, the mixture was stirred at ambient temperature and then was heated at 72°C for 1.5 h. The mixture was then cooled to ambient temperature and diluted with water (10 mL) and the pH was adjusted to 6-7 with IN hydrochloric acid (HC1) and saturated K2C03 and then the mixture was concentrated to dryness under vacuum. The residue was triturated in 20 L of hot water then allowed to cool to ambient temperature. The precipitate was collected by
filtration, washed with water and dried to obtain 0.08 g of the title compound as an off-white solid, mp >300βC. This material was identical to an authentic sample by TLC, and IR.

Exampl e 9
Synthesi s of 9- (2.3.5-Tri -0-benzyl - g-D-Arabinofuranosv1 )-2-fl uoroadenine
A mixture of 2-fl uoroadenine (0.50 g) , 2,3, 5-tri -O-benzyl -1-Qi-D-arabinofuranosyl chl oride (freshly prepared from

SUBSTITUTE SHEET 2.22 g of 2,3,5-Tri-O-benzyl-l-O-β-nitrobenzoyl- D-arabinofuranose) and N,N-diisopropylethyl amine (0.56 mL) in anhydrous N,N-dimethylformamide (10 L) was stirred at ambient temperature for 3 days under a nitrogen atmosphere. The mixture was then concentrated under high vacuum and the residue was partitioned between dichloromethane (200 mL) and water (25 mL). The organic phase was washed sequentially with saturated NaCl (50 mL), 1M H3P04 (50 mL) and saturated NaCl (25 mL), and was then dried over MgS04 and decolorizing carbon. The dried solution was filtered and concentrated under vacuum. The residue was purified by silica gel chromatography with 1% methanol in dichloromethane as eluent. The appropriate fractions were combined and
recrystallized from ethanol/toluene to obtain 0.39 g of the title compound. This material was identical by IR and TLC with an authentic sample.

This invention has been described in particular
reference to certain preferred embodiments thereof, but it will be understood that variations and modifications can be effected within the spirit and scope of the invention.

S 1 BSTTTUTE SHEET